STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2995Transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
ebA5056
Putative transcriptional regulator,lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.567
ebA5610
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.522
gcdH
Glutaryl-CoA dehydrogenase.
 
    0.499
ebA4487
Regulatory protein, GntR.
  
  
 0.488
gls1
Ferredoxin-dependent glutamate synthase.
     
 0.457
lysR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.450
ebA2985
Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL).
  
  
 0.441
coaT
CoA-transferase; Belongs to the CoA-transferase III family.
       0.420
lysR-4
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.417
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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