Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ebA3044 | ebA3046 | ebA3044 | ebA3046 | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | Aminotransferases class-IV. | 0.773 |
ebA3044 | ebA3051 | ebA3044 | ebA3051 | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | Hypothetical protein. | 0.455 |
ebA3044 | ebD70 | ebA3044 | ebD70 | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | Hypothetical protein; Belongs to the UPF0250 family. | 0.753 |
ebA3044 | lipA | ebA3044 | ebA3050 | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | Lipoic acid synthetase (Lip-syn) (Lipoate synthase), gene: LIPA OR RSC0322 OR RS03289; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.652 |
ebA3044 | lipB | ebA3044 | ebA3048 | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | Putative lipoate-protein ligase B (Lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.742 |
ebA3046 | ebA3044 | ebA3046 | ebA3044 | Aminotransferases class-IV. | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | 0.773 |
ebA3046 | ebA3051 | ebA3046 | ebA3051 | Aminotransferases class-IV. | Hypothetical protein. | 0.519 |
ebA3046 | ebD70 | ebA3046 | ebD70 | Aminotransferases class-IV. | Hypothetical protein; Belongs to the UPF0250 family. | 0.831 |
ebA3046 | lipA | ebA3046 | ebA3050 | Aminotransferases class-IV. | Lipoic acid synthetase (Lip-syn) (Lipoate synthase), gene: LIPA OR RSC0322 OR RS03289; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.717 |
ebA3046 | lipB | ebA3046 | ebA3048 | Aminotransferases class-IV. | Putative lipoate-protein ligase B (Lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.845 |
ebA3051 | ebA3044 | ebA3051 | ebA3044 | Hypothetical protein. | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | 0.455 |
ebA3051 | ebA3046 | ebA3051 | ebA3046 | Hypothetical protein. | Aminotransferases class-IV. | 0.519 |
ebA3051 | ebD70 | ebA3051 | ebD70 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0250 family. | 0.519 |
ebA3051 | lipA | ebA3051 | ebA3050 | Hypothetical protein. | Lipoic acid synthetase (Lip-syn) (Lipoate synthase), gene: LIPA OR RSC0322 OR RS03289; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.645 |
ebA3051 | lipB | ebA3051 | ebA3048 | Hypothetical protein. | Putative lipoate-protein ligase B (Lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.519 |
ebD70 | ebA3044 | ebD70 | ebA3044 | Hypothetical protein; Belongs to the UPF0250 family. | Putative penicillin-binding protein; Belongs to the peptidase S11 family. | 0.753 |
ebD70 | ebA3046 | ebD70 | ebA3046 | Hypothetical protein; Belongs to the UPF0250 family. | Aminotransferases class-IV. | 0.831 |
ebD70 | ebA3051 | ebD70 | ebA3051 | Hypothetical protein; Belongs to the UPF0250 family. | Hypothetical protein. | 0.519 |
ebD70 | lipA | ebD70 | ebA3050 | Hypothetical protein; Belongs to the UPF0250 family. | Lipoic acid synthetase (Lip-syn) (Lipoate synthase), gene: LIPA OR RSC0322 OR RS03289; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.767 |
ebD70 | lipB | ebD70 | ebA3048 | Hypothetical protein; Belongs to the UPF0250 family. | Putative lipoate-protein ligase B (Lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.904 |
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