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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixJTranscriptional regulatory protein fixJ. (210 aa)    
Predicted Functional Partners:
tcs2
Two-component sensor.
 
 0.977
ebA3063
Sensor histidine kinase.
 
 
 0.963
tdiS
Two-component sensor.
 
 
 0.782
dctS
Two component sensor protein.
 
 
 0.766
ebA3794
Histidine kinase; Complex two-component hybrid sensor component containing histidine kinase and response receiver domain.
 
 
 0.705
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 
 0.704
ebA126
Two-component sensor kinase.
 
 
 0.697
ebA3067
Probable cytochrome c5.
       0.682
ebA2146
Probable regulator protein containing CheR-and CheB-like domains.
  
 
 0.582
ebA6722
Histidine kinase.
 
 
 0.576
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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