STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3067Probable cytochrome c5. (152 aa)    
Predicted Functional Partners:
petC
Cytochrome C1 subunit of cytochrome bc1.
 
  
 0.759
cytC3
Di-Heme Cytochrome c, class IC.
 
   
 0.733
fixJ
Transcriptional regulatory protein fixJ.
       0.682
ebA3063
Sensor histidine kinase.
       0.682
cytC2
Cytochrome c, class IC.
 
   
 0.667
petA
Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.632
ctaA
Putative cytochrome aa3 oxidase assembly protein, related to CtaA.
 
     0.578
cytC4
Di-Heme cytochrome c.
 
   
 0.575
cytC1
Cytochrome c, class IC.
 
   
 0.566
ccoP
Cytochrome-cbb3 oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.523
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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