Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ebA3131Hypothetical protein. (159 aa)    
Predicted Functional Partners:
ebA3130
Predicted ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
 
     0.770
lolD
Probable ATP-binding component, ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
     0.651
ebA5293
Conserved hypothetical protein.
  
     0.645
ebA6806
ABC transporter, ATP-binding protein.
  
     0.580
ppcX
Probable UbiD-like carboxylase subunit encoded in anaerobic phenol operon; Belongs to the UbiD family.
 
     0.538
ebA3127
Conserved hypothetical protein, possibly related to phenol metabolism.
 
     0.528
ebA6813
ABC transporter, ATPase subunit.
  
     0.521
ebA2113
ATPase component ABC-type transport system.
  
     0.517
ebA5014
Similar to phosphate import ATP-binding protein pstB 1; Belongs to the ABC transporter superfamily.
  
     0.510
ebA4061
Putative ABC transporter protein,ATPase component.
  
     0.492
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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