STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amtAmmonium transporter. (450 aa)    
Predicted Functional Partners:
glnK
P2-like signal transmitter protein GlnK; Belongs to the P(II) protein family.
 
 0.998
glnB
P2-like signal transmitter protein GlnB; Belongs to the P(II) protein family.
 
 0.979
gls1
Ferredoxin-dependent glutamate synthase.
 
  
 0.753
ebA3154
Putative transmembrane protein.
 
    0.707
ntrB
Nitrogen assimilation sensor kinase.
 
 
 0.660
ebB96
Protein of unknown function.
       0.476
nadE
Glutamine-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.453
glnA
Glutamine synthetase protein.
  
  
 0.433
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
  
 
 0.403
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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