STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pchF-2Probable p-cresol methylhydroxylase subunit. (523 aa)    
Predicted Functional Partners:
pchC-2
Probable p-cresol methylhydroxylase subunit.
 
 
  0.995
pchA
P-hydroxybenzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.971
ebA310
FAD linked oxidase.
  
  
 
0.908
ebA5380
FAD dependent oxidase.
  
  
 
0.902
pchX
PchX protein; Related to p-cresol methylhydroxylase.
       0.747
ebA5686
TPP-containing decarboxylase related to benzoylformate decarboxylase or acetolactate synthase.
 
 
 
 0.538
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 0.520
glcD
Glycolate oxidase (FAD-linked subunit) oxidoreductase protein.
  
     0.473
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
 
 
 
 0.473
nagI-2
Putative gentisate 1,2-dioxygenase oxidoreductase protein.
  
   
 0.456
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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