STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3170Putative ABC transport protein; Belongs to the binding-protein-dependent transport system permease family. (366 aa)    
Predicted Functional Partners:
livG
Leucine/isoleucine/valine transport system ATP-binding protein.
 
 0.999
livF
Leucine/isoleucine/valine transport system ATP-binding protein.
 
 0.997
ebA3172
Putative amino-acid transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.995
ebA5307
Putativ ABC-transporter.
 
 0.988
ebA3560
Amino-acid composite ATP-binding transmembrane ABC transporter protein.
 
 0.985
ebA5309
Putative ABC-transporter.
 
 0.982
ebA3430
ATP-binding ABC transporter protein.
 
 0.981
ebA3429
ABC transporter subunit.
 
 0.968
ebA3173
Putative amino acid ABC transporter.
 
  
 0.954
livM
Predicted branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 0.936
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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