STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3188Conserved hypothetical protein. (96 aa)    
Predicted Functional Partners:
ebA3186
Conserved hypothetical protein.
 
     0.628
ebA3208
Cytochrome b561 family protein.
 
     0.612
ebA3189
Hypothetical protein.
       0.596
ebA3193
Putative Oxidoreductase, FAD-binding.
 
     0.563
ebA5146
Conserved hypothetical protein.
  
     0.515
ebA5384
Conserved hypothetical protein, similar to putative regulatory protein involved in in phenol degradation.
  
     0.426
ebA3194
Conserved hypothetical protein.
 
     0.419
ebA3127
Conserved hypothetical protein, possibly related to phenol metabolism.
  
     0.418
ebA3191
INTERPRO: probable Binding-protein-dependent transport systems inner membrane component.
       0.401
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.