Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA3295Transcriptional regulatory protein. (276 aa)    
Predicted Functional Partners:
ebA3296
Zn-dependent hydrolase.
 
     0.764
ebA5646
Transcriptional regulatory protein of IclR family.
  
     0.701
ebA3298
Conserved hypothetical protein, possible small subunit of monooxygenase.
 
     0.665
ebA3297
Putative aromatic monooxygenase.
 
   
 0.647
ebA4487
Regulatory protein, GntR.
 
  
 0.483
ebA3559
Putative branched-chain amino acid transport system protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.465
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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