STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3296Zn-dependent hydrolase. (320 aa)    
Predicted Functional Partners:
ebA3297
Putative aromatic monooxygenase.
 
  
 0.919
ebA3298
Conserved hypothetical protein, possible small subunit of monooxygenase.
 
     0.898
ebA3295
Transcriptional regulatory protein.
 
     0.763
ebA2769
Conserved hypothetical protein,predicted Rhodopsin-like G-protein coupled receptor superfamily.
 
      0.549
ebA3300
Potential fumarylacetoacetate hydrolase (extradiol catechol pathway).
 
  
 0.543
nagL
Maleylpyruvate isomerase.
 
 
 
 0.541
ebB100
Potential extradiol-cleaving dioxygenase of dihydroxy-substituted aromatic compound.
 
   
 0.523
paaR
Probable transcriptional regulator of paa operon.
  
   
 0.506
ebA2036
Putative thioesterase.
 
    0.433
ebA2889
Conserved hypothetical protein.
  
    0.421
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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