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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3297Putative aromatic monooxygenase. (559 aa)    
Predicted Functional Partners:
ebA3298
Conserved hypothetical protein, possible small subunit of monooxygenase.
 
    0.949
ebA3296
Zn-dependent hydrolase.
 
  
 0.919
ebB100
Potential extradiol-cleaving dioxygenase of dihydroxy-substituted aromatic compound.
 
   
 0.689
ebA3295
Transcriptional regulatory protein.
 
   
 0.644
ebA3300
Potential fumarylacetoacetate hydrolase (extradiol catechol pathway).
 
  
 0.635
paaR
Probable transcriptional regulator of paa operon.
  
 
 
 0.585
nagL
Maleylpyruvate isomerase.
 
   
 0.552
ebB188
Conserved hypothetical protein.
 
    0.538
ebA733
Hypothetical protein.
  
     0.485
idi1
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
   
  
 0.483
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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