STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3298Conserved hypothetical protein, possible small subunit of monooxygenase. (74 aa)    
Predicted Functional Partners:
ebA3297
Putative aromatic monooxygenase.
 
    0.949
ebA3296
Zn-dependent hydrolase.
 
     0.898
ebA3295
Transcriptional regulatory protein.
 
     0.664
ebB100
Potential extradiol-cleaving dioxygenase of dihydroxy-substituted aromatic compound.
 
     0.629
ebA2036
Putative thioesterase.
  
     0.591
ebA3300
Potential fumarylacetoacetate hydrolase (extradiol catechol pathway).
 
     0.591
ebB188
Conserved hypothetical protein.
 
     0.565
nagL
Maleylpyruvate isomerase.
 
     0.564
ebA733
Hypothetical protein.
  
     0.542
paaR
Probable transcriptional regulator of paa operon.
  
     0.527
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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