STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3320Probable two-component sensor. (422 aa)    
Predicted Functional Partners:
colR
DNA-binding response regulator ColR.
 
 
 0.964
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.927
ebA3314
Predicted PAP2 superfamily protein.
 
   
 0.842
ebA6722
Histidine kinase.
 
 
 
0.830
lpd
Pyruvate dehydrogenase multienzyme complex, Dihydrolipoamide dehydrogenase component.
   
 0.808
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
 
 
0.801
ebA6235
DNA-binding response regulator.
 
 
 0.786
ebA598
Conserved hypothetical protein,predicted sulfatase family.
 
     0.742
pilH
Type IV pilus response regulator PilH.
 
 
 0.734
ebA2024
Two component response regulator.
 
 
 0.688
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.