STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3346Hypothetical protein. (193 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.559
rpoC
DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.557
padI
Phenylglyoxylate:acceptor oxidoreductase.
   
   0.534
ebA1012
Molybdenum enzyme of unknown function,medium subunit.
   
    0.438
fdhB-2
Formate dehydrogenase iron-sulfur subunit.
   
    0.438
ttrB
Subunit B of a molybdenum enzyme, similar to that of tetrathionate reductase (TTRB).
   
    0.438
ebA5004
Iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase.
   
    0.438
padC
Phenylacetyl-CoA:acceptor oxidoreductase.
   
    0.438
padC2
Molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase.
   
    0.438
ebA6435
Molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, medium subunit.
   
    0.438
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.