Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA3362Hypothetical protein. (252 aa)    
Predicted Functional Partners:
ebA4796
Serine/threonine-protein kinase.
 
 
 0.933
ebA6352
Endonuclease.
   
 0.820
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.766
hptG
Chaperone protein htpG (High temperature protein G); Molecular chaperone. Has ATPase activity.
  
 0.764
ebA6328
Complex sensory protein with histidine kinase domain.
  
 
 0.742
sucA
2-oxoglutarate dehydrogenase complex, E1 component.
   
 
 0.728
ebA1212
Putative serine/threonine protein kinase.
 
 
 0.722
ebA3686
Hypothetical protein.
 
  
 0.700
ebA3023
Conserved hypothetical protein.
  
     0.679
ebA2790
Hypothetical protein.
  
 0.663
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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