STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3429ABC transporter subunit. (243 aa)    
Predicted Functional Partners:
ebA3425
Possible ABC transporter, permease protein precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 0.987
ebA3559
Putative branched-chain amino acid transport system protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.977
ebA2706
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.973
ebA5306
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.972
ebA3170
Putative ABC transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
livK
Predicted LivK, ABC-type branched-chain amino acid transport systems,periplasmic component.
 
  
 0.945
ebA3430
ATP-binding ABC transporter protein.
  
0.939
ebA3426
Probable transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.920
ebA5304
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.827
livG
Leucine/isoleucine/valine transport system ATP-binding protein.
  
0.785
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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