STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narLNitrate/nitrite TWO-component response regulator NARL. (220 aa)    
Predicted Functional Partners:
narX
Nitrate/nitrite TWO-component sensor NARX.
 
 0.997
narX-2
Nitrate/nitrite sensor kinase.
 0.989
ebA3727
Putative response regulator.
  
  
  0.976
narL-2
Nitrate/nitrite response regulator.
  
  
 
0.910
ebA6844
Sensory histidine kinase.
 
 
 0.895
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.892
tcs1
Two-component sensor.
 
 
 0.857
ebA5750
Putative sensory protein, two-component system.
 
 
 0.857
ebA5715
Two-component system sensor kinase.
 
 
 0.848
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
  
 
 0.778
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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