Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c2B001 | cytC6 | c2B001 | ebA1004 | Hypothetical protein. | Probable di-heme cytochrome c. | 0.762 |
c2B001 | ebA1863 | c2B001 | ebA1863 | Hypothetical protein. | Hypothetical protein. | 0.768 |
c2B001 | ebA2239 | c2B001 | ebA2239 | Hypothetical protein. | Hypothetical protein. | 0.754 |
c2B001 | ebA3729 | c2B001 | ebA3729 | Hypothetical protein. | Putative two-component sensor protein. | 0.705 |
c2B001 | ebA5188 | c2B001 | ebA5188 | Hypothetical protein. | Hypothetical protein. | 0.736 |
c2B001 | ebA5371 | c2B001 | ebA5371 | Hypothetical protein. | Hybrid sensor component of two-component regulation system. | 0.749 |
c2B001 | mdoB | c2B001 | ebA3535 | Hypothetical protein. | Phosphoglycerol transferase I. | 0.664 |
c2B001 | padD | c2B001 | ebA5396 | Hypothetical protein. | Phenylacetyl-CoA:acceptor oxidoreductase. | 0.766 |
cytC6 | c2B001 | ebA1004 | c2B001 | Probable di-heme cytochrome c. | Hypothetical protein. | 0.762 |
cytC6 | ebA1863 | ebA1004 | ebA1863 | Probable di-heme cytochrome c. | Hypothetical protein. | 0.762 |
cytC6 | ebA2239 | ebA1004 | ebA2239 | Probable di-heme cytochrome c. | Hypothetical protein. | 0.687 |
cytC6 | ebA3729 | ebA1004 | ebA3729 | Probable di-heme cytochrome c. | Putative two-component sensor protein. | 0.572 |
cytC6 | ebA5188 | ebA1004 | ebA5188 | Probable di-heme cytochrome c. | Hypothetical protein. | 0.709 |
cytC6 | ebA5371 | ebA1004 | ebA5371 | Probable di-heme cytochrome c. | Hybrid sensor component of two-component regulation system. | 0.751 |
cytC6 | mdoB | ebA1004 | ebA3535 | Probable di-heme cytochrome c. | Phosphoglycerol transferase I. | 0.551 |
cytC6 | padD | ebA1004 | ebA5396 | Probable di-heme cytochrome c. | Phenylacetyl-CoA:acceptor oxidoreductase. | 0.771 |
dadX | mdoB | ebA3534 | ebA3535 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Phosphoglycerol transferase I. | 0.483 |
ebA1863 | c2B001 | ebA1863 | c2B001 | Hypothetical protein. | Hypothetical protein. | 0.768 |
ebA1863 | cytC6 | ebA1863 | ebA1004 | Hypothetical protein. | Probable di-heme cytochrome c. | 0.762 |
ebA1863 | ebA2239 | ebA1863 | ebA2239 | Hypothetical protein. | Hypothetical protein. | 0.691 |
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