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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaZPaaZ protein involved in aerobic phenylacetate metabolism. (554 aa)    
Predicted Functional Partners:
paaY
Putative carbonic anhydrases/acetyltransferase.
     
 0.832
paaG
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.824
paaI
Putative thioesterase PaaI involved in aerobic phenylacetate metabolism.
 
   
 0.775
paaH
3-Hydroxyacyl-CoA dehydrogenase PaaH involved in aerobic phenylacetate metabolism.
 
 
 0.711
paaK
Aerobic phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
   
 
 0.709
paaA
Putativ ring-oxidation complex protein 1.
 
  
 0.674
paaB
PaaB protein; Related to aerobic phenylacetate degradation.
  
  
 0.613
ackA-2
Similar to acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.603
boxA
Benzoyl-CoA oxygenase component A.
   
 
 0.590
paaD
Putative ring oxidation complex protein 3.
 
  
 0.564
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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