STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaKAerobic phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (440 aa)    
Predicted Functional Partners:
paaA
Putativ ring-oxidation complex protein 1.
 
 
 0.937
paaD
Putative ring oxidation complex protein 3.
 
  
 0.906
paaB
PaaB protein; Related to aerobic phenylacetate degradation.
  
 
 0.905
padB
Phenylacetyl-CoA:acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.902
padA
Phenylacetyl-CoA:acceptor oxidoreductase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
     
  0.900
padC
Phenylacetyl-CoA:acceptor oxidoreductase.
     
  0.900
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
     
  0.900
paaC
Putativ ring-hydroxylation complex protein 2.
  
 
 0.899
paaI
Putative thioesterase PaaI involved in aerobic phenylacetate metabolism.
 
  
 0.898
paaE
Probable ring-hydroxylation complex protein 4.
  
 
 0.802
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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