STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaAPutativ ring-oxidation complex protein 1. (334 aa)    
Predicted Functional Partners:
paaB
PaaB protein; Related to aerobic phenylacetate degradation.
 
 0.999
paaC
Putativ ring-hydroxylation complex protein 2.
 0.999
paaC2
Similar to aerobic phenylacetate degradation protein.
 0.997
paaD
Putative ring oxidation complex protein 3.
 
 
 0.996
paaB2
PaaB2 protein; Similar to aerobic phenylacetate degradation protein.
 
 0.996
paaE
Probable ring-hydroxylation complex protein 4.
 
 0.992
paaI
Putative thioesterase PaaI involved in aerobic phenylacetate metabolism.
 
 
 0.991
paaD2
Similar to aerobic phenylacetate degradation protein.
 
 
 0.990
paaE2
Similar to aerobic phenylacetate degradation protein.
 
 0.985
paaG
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.945
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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