Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA3574Universal stress protein (Usp). (146 aa)    
Predicted Functional Partners:
ebA3576
Predicted integral membrane protein TerC family.
 
     0.856
cutA1
Divalent cation tolerance protein.
       0.773
cutA2
Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.
  
  
 0.713
ebA1926
Predicted universal stress protein (Usp).
  
     0.676
ribE
Riboflavin synthase (alpha chain).
       0.473
uspA
Universal stress protein.
  
     0.444
ada
6-O-Methylguanine-methyltransferase.
  
  
 0.441
ada-2
Methylated DNA-protein cysteine methyltransferase.
  
  
 0.441
ebB151
Conserved hypothetical protein.
  
    0.437
nodJ
Nodulation protein J.
     
 0.415
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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