Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ada | ebA3574 | ebA4378 | ebA3574 | 6-O-Methylguanine-methyltransferase. | Universal stress protein (Usp). | 0.427 |
| ada | uspA | ebA4378 | ebA222 | 6-O-Methylguanine-methyltransferase. | Universal stress protein. | 0.427 |
| ada-2 | ebA3574 | ebA7193 | ebA3574 | Methylated DNA-protein cysteine methyltransferase. | Universal stress protein (Usp). | 0.427 |
| ada-2 | uspA | ebA7193 | ebA222 | Methylated DNA-protein cysteine methyltransferase. | Universal stress protein. | 0.427 |
| cutA1 | cutA2 | ebA3572 | ebA3571 | Divalent cation tolerance protein. | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.825 |
| cutA1 | ebA3574 | ebA3572 | ebA3574 | Divalent cation tolerance protein. | Universal stress protein (Usp). | 0.778 |
| cutA1 | ebA3576 | ebA3572 | ebA3576 | Divalent cation tolerance protein. | Predicted integral membrane protein TerC family. | 0.732 |
| cutA1 | nodJ | ebA3572 | ebA3579 | Divalent cation tolerance protein. | Nodulation protein J. | 0.474 |
| cutA1 | ribE | ebA3572 | ebA3569 | Divalent cation tolerance protein. | Riboflavin synthase (alpha chain). | 0.529 |
| cutA2 | cutA1 | ebA3571 | ebA3572 | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Divalent cation tolerance protein. | 0.825 |
| cutA2 | ebA3574 | ebA3571 | ebA3574 | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Universal stress protein (Usp). | 0.711 |
| cutA2 | ebA3576 | ebA3571 | ebA3576 | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Predicted integral membrane protein TerC family. | 0.653 |
| cutA2 | nodJ | ebA3571 | ebA3579 | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Nodulation protein J. | 0.441 |
| cutA2 | ribE | ebA3571 | ebA3569 | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Riboflavin synthase (alpha chain). | 0.566 |
| ebA1926 | ebA3574 | ebA1926 | ebA3574 | Predicted universal stress protein (Usp). | Universal stress protein (Usp). | 0.676 |
| ebA1926 | uspA | ebA1926 | ebA222 | Predicted universal stress protein (Usp). | Universal stress protein. | 0.417 |
| ebA3574 | ada | ebA3574 | ebA4378 | Universal stress protein (Usp). | 6-O-Methylguanine-methyltransferase. | 0.427 |
| ebA3574 | ada-2 | ebA3574 | ebA7193 | Universal stress protein (Usp). | Methylated DNA-protein cysteine methyltransferase. | 0.427 |
| ebA3574 | cutA1 | ebA3574 | ebA3572 | Universal stress protein (Usp). | Divalent cation tolerance protein. | 0.778 |
| ebA3574 | cutA2 | ebA3574 | ebA3571 | Universal stress protein (Usp). | Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.711 |
page 1 of 3