Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA3626Hypothetical protein. (158 aa)    
Predicted Functional Partners:
ebB92
Hypothetical protein.
  
     0.737
ebA3180
Hypothetical protein.
  
     0.695
ebA6064
Probable thioredoxin-like protein.
  
     0.637
ebA2737
Hypothetical protein.
  
     0.635
ebA3176
Hypothetical protein.
  
     0.619
citE
Malyl-CoA lyase or Citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
     0.600
phbC
Putative poly-beta-hydroxybutyrate synthase.
       0.563
ebA5828
Conserved hypothetical protein.
  
     0.545
ebB211
HNS-like transcription regulator protein.
  
     0.532
ebA3630
Putative metallo-beta-lactamase family protein.
       0.530
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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