STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phbCPutative poly-beta-hydroxybutyrate synthase. (607 aa)    
Predicted Functional Partners:
phbB
Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.973
ebA4434
Putative maoC-like dehydratase.
 
  
 0.936
adh-2
Short-chain dehydrogenase/reductase,possibly involved in polyhydroxybutyrate (PHB) synthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.925
fadB
Alpha-subunit of fatty acid oxidation complex.
     
 0.907
ebA3630
Putative metallo-beta-lactamase family protein.
       0.726
phbR
Predicted Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.715
ebA5823
Putative Esterase/lipase/thioesterase family protein.
  
   
 0.594
pta
Putative phosphate acetyltransferase (EC 2.3.1.8), gene: PTA OR RPA4567.
  
 0.572
ebA3626
Hypothetical protein.
       0.563
ebA5834
Conserved hypothetical protein.
 
   
 0.531
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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