STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3640Putative acyl CoA dehydrogenase oxidoreductase protein. (377 aa)    
Predicted Functional Partners:
ebA3639
Putative acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.984
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.976
pta
Putative phosphate acetyltransferase (EC 2.3.1.8), gene: PTA OR RPA4567.
  
 0.941
ech
Putative enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.937
paaF
Putative enoyl-CoA hydratase protein.
  
 0.937
ebA720
Enoyl-CoA hydratase.
  
 0.937
ebA4434
Putative maoC-like dehydratase.
  
 0.934
fadA
Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.933
c2A172
beta-Ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.933
ebA2049
Putative beta-oxoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.933
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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