STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3650Conserved hypothetical protein,predicted Uncharacterised P-loop ATPase protein family; Displays ATPase and GTPase activities. (292 aa)    
Predicted Functional Partners:
ptsN
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
  
 0.766
cafA
Ribonuclease G (RNase G).
   
 
 0.665
rne
Ribonuclease E (RNase E); Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
   
 
 0.665
ebA3647
Putative beta lactamase protein.
     
 0.550
ebA3652
Hypothetical protein.
       0.541
MRSA
Phosphoglucomutase and phosphomannomutase family, gene: MRSA OR NE0530; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
   
 0.537
ebA1337
PhoH-like protein.
  
     0.535
ebB119
Hypothetical protein.
       0.441
ptsH
Sugar transport PTS system phosphocarrier protein HPR.
  
  
 0.426
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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