Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ebA3652Hypothetical protein. (180 aa)    
Predicted Functional Partners:
ebA4769
Hypothetical protein.
 
   
 0.790
rnfF
Protein related to RnfF or ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.710
rnfC-2
Putative electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
     0.594
rfnD
Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
     0.581
ebA1048
Hypothetical protein.
  
     0.562
rnfG-2
Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
     0.551
rnfE-2
NADH:ubiquinone oxidoreductase, subunit RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
     0.540
rseC
Hypothetical protein, INTERPRO suggestion: probable positive regulator of sigma(E).
 
     0.532
ebA3650
Conserved hypothetical protein,predicted Uncharacterised P-loop ATPase protein family; Displays ATPase and GTPase activities.
       0.526
rnfA-2
NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
     0.494
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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