STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3654Alcohol dehydrogenase. (327 aa)    
Predicted Functional Partners:
pta
Putative phosphate acetyltransferase (EC 2.3.1.8), gene: PTA OR RPA4567.
  
 0.925
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.921
ebA3640
Putative acyl CoA dehydrogenase oxidoreductase protein.
 
 0.921
ech
Putative enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.908
paaF
Putative enoyl-CoA hydratase protein.
  
 0.908
ebA7223
Predicted Zinc-containing alcohol dehydrogenase.
  
  
 
0.907
pccB
Propionyl-CoA carboxylase beta subunit.
   
 
 0.906
acsA
Putative acetyl-coenzyme A synthetase.
   
 
 0.903
acsA-2
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.903
ebA4717
Acyl-CoA synthetase.
   
 
 0.903
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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