Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA3670Conserved hypothetical protein. (216 aa)    
Predicted Functional Partners:
ebA3668
Electron transport protein SCO1/SenC.
 
   
 0.947
coxA2
Cytochrome c oxidase, subunit I (EC 1.9.3.1).
 
   
 0.945
coxB2
Probable cytochrome-c oxidase subunit II.
 
   
 0.930
ebA2886
Protein SCO1; Predicted uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
   
 0.772
ebA3117
Similar to transmembrane protein.
  
     0.705
ebA6293
Hypothetical protein.
  
     0.604
ebA4281
Conserved hypothetical protein.
  
     0.557
ebA1863
Hypothetical protein.
  
     0.541
ebA4071
Hypothetical protein.
  
     0.528
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
  
     0.482
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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