STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA3686Hypothetical protein. (380 aa)    
Predicted Functional Partners:
ebA4715
Hypothetical protein.
 
  
 0.742
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.731
rseC
Hypothetical protein, INTERPRO suggestion: probable positive regulator of sigma(E).
  
    0.721
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
  
     0.710
ebA4712
Probable regulatory protein, LysR.
  
     0.708
ebA3362
Hypothetical protein.
 
  
 0.700
ebA5188
Hypothetical protein.
 
     0.689
ebA7139
Hypothetical protein; INTERPRO suggestion: probable Sugar transporter superfamily.
 
    0.684
ebA521
Hypothetical protein.
 
  
 0.682
c2B001
Hypothetical protein.
  
     0.678
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.