STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3718Hypothetical protein, Flp pilus assembly protein, protease. (188 aa)    
Predicted Functional Partners:
cpaB
Pilus assembly transmembrane protein.
 
  
 0.971
ebA3703
Putative Flp pilus assembly protein.
 
  
 0.942
ebA3707
Flp pilus assembly protein, ATPase.
 
  
 0.931
ebA3716
Conserved hypothetical protein, predicted ATPase with chaperone activity.
 
     0.928
cpaC
Probable outer membrane channel protein,probably involved in pilus assembly; Belongs to the bacterial secretin family.
 
  
 0.917
ebA3709
Hypothetical protein.
 
  
 0.898
ebA3705
Probable secretion ATPase protein,similar to bacterial type II secretion system protein E.
 
   
 0.862
ebA3711
Hypothetical protein.
 
     0.857
ebD22
INTERPRO: probable Flp/Fap pilin component.
 
  
 0.854
flp-2
Pilus assembly protein, pilin component.
 
  
 0.854
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.