STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA3757DNA-binding response regulator. (241 aa)    
Predicted Functional Partners:
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.927
ebA3758
Sensory box histidine kinase/response regulator, C-terminal part.
 
 
 0.886
ebA3436
Putative Sensory box histidine kinase/response regulator.
 
 
 0.876
ebA4466
Predicted histidine kinase-like ATPase.
 
 
 0.791
ebA6498
Sensor histidine kinase.
 
 
 0.786
ebA6722
Histidine kinase.
 
 
 0.751
ebA1181
Sensor histidine kinase transcription,regulator protein.
 
 
 0.749
ebA2023
Two component sensor regulator; Member of a two-component regulatory system.
 
 
 0.743
phoR
Sensory transduction histidine kinases.
 
 
 0.740
ebA6233
Sensor histidine kinase.
 
 
 0.725
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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