STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dldHD-lactate dehydrogenase (acceptor: cytochrome). (469 aa)    
Predicted Functional Partners:
maeB2
NADP-dependent malic enzyme.
  
 
 0.915
maeB1
NADP-dependent malic enzyme.
  
 
 0.915
pykA
Pyruvate kinase II protein; Belongs to the pyruvate kinase family.
   
 0.910
poxB
Pyruvate oxidase; Belongs to the TPP enzyme family.
   
 0.908
aceE
Pyruvate dehydrogenase multienzyme complex, E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.902
korA2
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
    
 0.902
korA
2-ketoglutarate: NADP oxidoreductase,alpha subunit.
    
 0.902
ppsA-2
Similar to subunit A of phenylphosphate synthetase and phosphoenolpyruvate synthase.
    
 0.902
ppsB-2
Similar to subunit B of phenylphosphate synthetase or phosphoenolpyruvate synthase.
    
 0.902
pps
Phosphoenolpyruvate synthetase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.902
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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