STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marR-2Transcriptional regulator (MarR family). (158 aa)    
Predicted Functional Partners:
ebA3906
Conserved hypothetical protein,predicted sugar transporter superfamily.
 
   
 0.874
ampD
Putative anhydro-N-acetylmuramyl-tripeptide amidase (AmpD protein).
     
 0.534
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
  
 0.490
ebA5188
Hypothetical protein.
  
     0.474
ebA3903
Hypothetical protein.
       0.469
ebA3670
Conserved hypothetical protein.
  
     0.429
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.