STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3918Predicted Fe-S oxidoreductase. (262 aa)    
Predicted Functional Partners:
ebA3917
Putative iron-sulfur binding protein.
 
 0.997
ebA4051
Putative iron-sulfur binding protein.
 
 0.985
ebA3914
Hypothetical protein.
 
 
 0.977
ebA4052
Conserved hypothetical protein.
 
 
 0.903
ebA3922
Hypothetical protein.
       0.773
sdhB
Succinate dehydrogenase (Iron-sulfur subunit) oxidoreductase protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
 
 0.626
glcG
Uncharacterized protein, possibly involved in utilization of glycolate or propanediol.
  
  
 0.589
hlyD
Predicted secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.543
czcA
Probable cation efflux system protein CZCA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.543
sdhB-2
Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
 
 0.543
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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