STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3918Predicted Fe-S oxidoreductase. (262 aa)    
Predicted Functional Partners:
ebA3917
Putative iron-sulfur binding protein.
 
 0.997
ebA4051
Putative iron-sulfur binding protein.
 
 0.985
ebA3914
Hypothetical protein.
 
 
 0.975
ebA4052
Conserved hypothetical protein.
 
 
 0.895
ebA3922
Hypothetical protein.
       0.773
glcG
Uncharacterized protein, possibly involved in utilization of glycolate or propanediol.
  
  
 0.637
sdhB
Succinate dehydrogenase (Iron-sulfur subunit) oxidoreductase protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
   0.564
hlyD
Predicted secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.543
czcA
Probable cation efflux system protein CZCA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.543
ebA3912
Hypothetical protein.
       0.499
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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