STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA3985Glycosyl transferase. (306 aa)    
Predicted Functional Partners:
ebA3984
Carbamoyltransferase, NodU family.
       0.782
ebA3987
Hypothetical protein.
       0.697
galE
UDP-glucose 4-epimerase, gene: SP1607; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.576
exoW
Putative glycosyltransferase, possibly involved in succinoglycan biosynthesis protein.
 
     0.571
ebB174
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.566
ebA6959
Hypothetical protein.
   
    0.551
ebA4275
Putative glycosyl transferase, gene fragment.
 
 
 0.535
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.527
glmS
Glutamine amidotransferase class-II; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
  
 0.488
galE1
Similar to UDP-glucose 4-epimerase.
 
 
 0.485
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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