STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSC2398ATP-binding ABC transporter protein. (259 aa)    
Predicted Functional Partners:
ebA4019
Probable transmembrane ABC transporter protein, permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.998
ebA3688
Probable substrate-binding periplasmic (PBP) ABC transporter protein.
 
 
 0.972
ebA3624
Predicted ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
 
 0.910
cobO
Cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
       0.825
cobB
Cobyrinic acid a,c-diamide synthase family protein.
   
 0.791
ebA1866
High-affinity iron permease.
   
  
 0.723
ebA4013
Putative TONB-dependent receptor.
     
 0.679
ebA4029
Nitroreductase family protein.
  
  
 0.614
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
 
  
 0.586
ebA4893
Putative iron utilization protein.
   
  
 0.563
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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