STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4048Putative transcription regulator protein, IclR family. (263 aa)    
Predicted Functional Partners:
ebA4487
Regulatory protein, GntR.
 
  
 0.681
ebA3736
Putative gntR-family transcriptional regulator.
  
  
 0.629
ebA4050
Predicted Fe-S oxidoreductase.
  
  
 0.566
ebA2047
Transcriptional regulator, GntR family.
  
  
 0.563
ebA4051
Putative iron-sulfur binding protein.
       0.562
gntR
Transcriptional regulator.
  
  
 0.502
ebA4052
Conserved hypothetical protein.
       0.408
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.