Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
coaE | ebA4108 | ebA4105 | ebA4108 | Predicted dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | Hypothetical protein. | 0.838 |
coaE | zapD | ebA4105 | ebA4104 | Predicted dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.947 |
ebA2832 | ebA5997 | ebA2832 | ebA5997 | Conserved hypothetical protein. | Putative outer membrane protein; Belongs to the skp family. | 0.644 |
ebA2832 | ebA6459 | ebA2832 | ebA6459 | Conserved hypothetical protein. | Generic methyl-transferase. | 0.455 |
ebA2832 | ebB29 | ebA2832 | ebB29 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.738 |
ebA2832 | nirE | ebA2832 | ebA1162 | Conserved hypothetical protein. | Uroporphyrin-III C-methyltransferase. | 0.432 |
ebA2832 | zapD | ebA2832 | ebA4104 | Conserved hypothetical protein. | Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.654 |
ebA4108 | coaE | ebA4108 | ebA4105 | Hypothetical protein. | Predicted dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.838 |
ebA4108 | ebA972 | ebA4108 | ebA972 | Hypothetical protein. | Probable transmembrane protein. | 0.499 |
ebA4108 | zapD | ebA4108 | ebA4104 | Hypothetical protein. | Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.646 |
ebA5997 | ebA2832 | ebA5997 | ebA2832 | Putative outer membrane protein; Belongs to the skp family. | Conserved hypothetical protein. | 0.644 |
ebA5997 | ebA6459 | ebA5997 | ebA6459 | Putative outer membrane protein; Belongs to the skp family. | Generic methyl-transferase. | 0.485 |
ebA5997 | ebB29 | ebA5997 | ebB29 | Putative outer membrane protein; Belongs to the skp family. | Conserved hypothetical protein. | 0.494 |
ebA5997 | zapD | ebA5997 | ebA4104 | Putative outer membrane protein; Belongs to the skp family. | Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.723 |
ebA6459 | ebA2832 | ebA6459 | ebA2832 | Generic methyl-transferase. | Conserved hypothetical protein. | 0.455 |
ebA6459 | ebA5997 | ebA6459 | ebA5997 | Generic methyl-transferase. | Putative outer membrane protein; Belongs to the skp family. | 0.485 |
ebA6459 | ebA972 | ebA6459 | ebA972 | Generic methyl-transferase. | Probable transmembrane protein. | 0.593 |
ebA6459 | ebB29 | ebA6459 | ebB29 | Generic methyl-transferase. | Conserved hypothetical protein. | 0.455 |
ebA6459 | nirE | ebA6459 | ebA1162 | Generic methyl-transferase. | Uroporphyrin-III C-methyltransferase. | 0.467 |
ebA6459 | zapD | ebA6459 | ebA4104 | Generic methyl-transferase. | Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.628 |
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