Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amt | ebA791 | ebA3151 | ebA791 | Ammonium transporter. | Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains. | 0.439 |
| amt | glnA | ebA3151 | ebA4121 | Ammonium transporter. | Glutamine synthetase protein. | 0.442 |
| amt | glnB | ebA3151 | ebA7048 | Ammonium transporter. | P2-like signal transmitter protein GlnB; Belongs to the P(II) protein family. | 0.981 |
| amt | glnK | ebA3151 | ebB95 | Ammonium transporter. | P2-like signal transmitter protein GlnK; Belongs to the P(II) protein family. | 0.998 |
| amt | ntrB | ebA3151 | ebA4117 | Ammonium transporter. | Nitrogen assimilation sensor kinase. | 0.659 |
| ebA4118 | glnA | ebA4118 | ebA4121 | Hypothetical protein. | Glutamine synthetase protein. | 0.543 |
| ebA4118 | ntrB | ebA4118 | ebA4117 | Hypothetical protein. | Nitrogen assimilation sensor kinase. | 0.647 |
| ebA4118 | ntrC | ebA4118 | ebA4116 | Hypothetical protein. | Nitrogen assimilation response regulator; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.513 |
| ebA6328 | ebA6722 | ebA6328 | ebA6722 | Complex sensory protein with histidine kinase domain. | Histidine kinase. | 0.851 |
| ebA6328 | ebA791 | ebA6328 | ebA791 | Complex sensory protein with histidine kinase domain. | Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains. | 0.933 |
| ebA6328 | glnA | ebA6328 | ebA4121 | Complex sensory protein with histidine kinase domain. | Glutamine synthetase protein. | 0.420 |
| ebA6328 | glnB | ebA6328 | ebA7048 | Complex sensory protein with histidine kinase domain. | P2-like signal transmitter protein GlnB; Belongs to the P(II) protein family. | 0.452 |
| ebA6328 | glnK | ebA6328 | ebB95 | Complex sensory protein with histidine kinase domain. | P2-like signal transmitter protein GlnK; Belongs to the P(II) protein family. | 0.452 |
| ebA6328 | ntrB | ebA6328 | ebA4117 | Complex sensory protein with histidine kinase domain. | Nitrogen assimilation sensor kinase. | 0.656 |
| ebA6328 | phoB | ebA6328 | ebA3019 | Complex sensory protein with histidine kinase domain. | Phosphate regulon transcriptional regulatory protein phoB. | 0.494 |
| ebA6722 | ebA6328 | ebA6722 | ebA6328 | Histidine kinase. | Complex sensory protein with histidine kinase domain. | 0.851 |
| ebA6722 | ebA791 | ebA6722 | ebA791 | Histidine kinase. | Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains. | 0.948 |
| ebA6722 | ntrB | ebA6722 | ebA4117 | Histidine kinase. | Nitrogen assimilation sensor kinase. | 0.833 |
| ebA6722 | ntrC | ebA6722 | ebA4116 | Histidine kinase. | Nitrogen assimilation response regulator; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.427 |
| ebA6722 | phoB | ebA6722 | ebA3019 | Histidine kinase. | Phosphate regulon transcriptional regulatory protein phoB. | 0.680 |
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