STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4131Probable short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (236 aa)    
Predicted Functional Partners:
bbsC
Subunit of 2-[hydroxy(phenyl)methyl]-succinyl-CoA DH.
  
 
   0.815
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
 
 
 0.734
ebA4458
Probable short chain dehydrogenase.
 
  
 0.546
ebA4129
Conserved hypothetical protein.
       0.541
ebA5423
Conserved hypothetical protein with ankyrin-repeat.
  
 0.492
ebA2038
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
 
 0.436
ebA6882
Probable ABC transport protein, ATP-binding protein.
  
 
 
 0.404
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.