Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dctR | dctS | ebA4154 | ebA4156 | Two-component response regulator. | Two component sensor protein. | 0.995 |
dctR | ebA3436 | ebA4154 | ebA3436 | Two-component response regulator. | Putative Sensory box histidine kinase/response regulator. | 0.493 |
dctR | ebA3758 | ebA4154 | ebA3758 | Two-component response regulator. | Sensory box histidine kinase/response regulator, C-terminal part. | 0.483 |
dctR | ebA3794 | ebA4154 | ebA3794 | Two-component response regulator. | Histidine kinase; Complex two-component hybrid sensor component containing histidine kinase and response receiver domain. | 0.639 |
dctR | ebA6051 | ebA4154 | ebA6051 | Two-component response regulator. | Putative sensory transduction histidine kinase of highly complex domain structure. | 0.649 |
dctR | ebA791 | ebA4154 | ebA791 | Two-component response regulator. | Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains. | 0.504 |
dctS | dctR | ebA4156 | ebA4154 | Two component sensor protein. | Two-component response regulator. | 0.995 |
dctS | ebA2985 | ebA4156 | ebA2985 | Two component sensor protein. | Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL). | 0.916 |
dctS | ebA3436 | ebA4156 | ebA3436 | Two component sensor protein. | Putative Sensory box histidine kinase/response regulator. | 0.899 |
dctS | ebA3758 | ebA4156 | ebA3758 | Two component sensor protein. | Sensory box histidine kinase/response regulator, C-terminal part. | 0.902 |
dctS | ebA3761 | ebA4156 | ebA3761 | Two component sensor protein. | Sensory box histidine kinase/response regulator, N-terminal part. | 0.850 |
dctS | ebA3794 | ebA4156 | ebA3794 | Two component sensor protein. | Histidine kinase; Complex two-component hybrid sensor component containing histidine kinase and response receiver domain. | 0.875 |
dctS | ebA6051 | ebA4156 | ebA6051 | Two component sensor protein. | Putative sensory transduction histidine kinase of highly complex domain structure. | 0.944 |
dctS | ebA6328 | ebA4156 | ebA6328 | Two component sensor protein. | Complex sensory protein with histidine kinase domain. | 0.837 |
dctS | ebA6882 | ebA4156 | ebA6882 | Two component sensor protein. | Probable ABC transport protein, ATP-binding protein. | 0.850 |
dctS | ebA791 | ebA4156 | ebA791 | Two component sensor protein. | Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains. | 0.926 |
ebA2985 | dctS | ebA2985 | ebA4156 | Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL). | Two component sensor protein. | 0.916 |
ebA2985 | ebA3436 | ebA2985 | ebA3436 | Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL). | Putative Sensory box histidine kinase/response regulator. | 0.930 |
ebA2985 | ebA3758 | ebA2985 | ebA3758 | Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL). | Sensory box histidine kinase/response regulator, C-terminal part. | 0.930 |
ebA2985 | ebA3761 | ebA2985 | ebA3761 | Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL). | Sensory box histidine kinase/response regulator, N-terminal part. | 0.891 |
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