Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
dctMC4-dicarboxylate transport system permease, large subunit. (427 aa)    
Predicted Functional Partners:
dctQ
C4-dicarboxylate transport system,permease small subunit.
 
 0.990
dctP
C4-dicarboxylate-binding periplasmic protein.
  
 0.962
dctP-2
Predicted TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.845
DCTP-2
Dicarboxylate transport protein.
 
  
 0.815
DCTP
Dicarboxylate transport, gene: DCTP OR PM1525.
 
  
 0.803
ebB188
Conserved hypothetical protein.
  
 
 0.694
ebA4157
Hypothetical protein.
       0.558
dctS
Two component sensor protein.
 
     0.504
ocd
Ornithine cyclodeaminase.
       0.481
dctR
Two-component response regulator.
       0.420
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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