STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4165Hypothetical protein. (234 aa)    
Predicted Functional Partners:
ebA4796
Serine/threonine-protein kinase.
 
 
 
 0.827
ebA4167
cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily.
 
     0.815
ebA1212
Putative serine/threonine protein kinase.
 
 
 0.796
c1A29
Protein kinase.
 
 
 
 0.763
c1A229
Phosphatase 2C domain.
 
 
 0.745
ebA5537
Hypothetical protein.
 
     0.721
ebA1400
Conserved hypothetical protein.
  
     0.688
ebA3326
Hypothetical protein.
  
     0.663
ebA4764
Similar to Tfp pilus assembly protein FimV.
  
   
 0.657
ocd
Ornithine cyclodeaminase.
       0.650
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.