STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4165Hypothetical protein. (234 aa)    
Predicted Functional Partners:
ebA4796
Serine/threonine-protein kinase.
 
 
 
 0.829
ebA4167
cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily.
 
     0.814
c1A29
Protein kinase.
 
 
 
 0.768
c1A229
Phosphatase 2C domain.
 
 
 0.739
ebA1212
Putative serine/threonine protein kinase.
 
 
 0.723
ebA5537
Hypothetical protein.
 
     0.721
sucA
2-oxoglutarate dehydrogenase complex, E1 component.
    
 
 0.712
ebA1400
Conserved hypothetical protein.
  
     0.688
ebA3326
Hypothetical protein.
  
     0.663
ebA4764
Similar to Tfp pilus assembly protein FimV.
  
     0.656
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.