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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4180Uncharacterized protein involved in exopolysaccharide biosynthesis. (664 aa)    
Predicted Functional Partners:
wza
Putative polysaccharide export protein.
 
 
 0.814
ebA1174
Conserved hypothetical protein.
 
 
 0.797
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.737
ebA4277
Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase.
 
  
 0.734
ebA4183
Hypothetical protein.
       0.714
ebA4303
Conserved hypothetical protein; possible esterase/lipase/thioesterase.
  
     0.695
ebA4319
Conserved hypothetical protein.
 
     0.694
ebA4264
Glycosyl transferase, group 1.
 
  
 0.672
ebA4261
Conserved hypothetical protein.
 
     0.667
gumB
Polysaccharide export protein.
 
 
 0.665
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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