STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyfDFormate hydrogenlyase membrane subunit subunit HyfD. (315 aa)    
Predicted Functional Partners:
hyfG
Subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenases.
 
 
 0.997
hyfI
Subunit of putative formate hydrogenlyase-like membrane complex.
 
 
 0.996
hyfB
Hydrogenase-4 component B.
 
 
 0.990
hyfF
Formate hydrogenlyase subunit, similar to NuoM subunit of complex I.
 
 
 0.989
hyfE
Hydrogenase 4 membrane component.
 
  
 0.975
korC
2-ketoglutarate: NADP oxidoreductase gamma subunit.
  
 
 0.841
nuoI
NADH dehydrogenase I, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.837
ebA6418
Hypothetical protein.
  
 
 0.827
phaD
pH adaptation potassium efflux protein.
  
 
 0.802
phaA
pH adaptation potassium efflux protein.
  
 
 0.793
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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