STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4198Hypothetical protein. (74 aa)    
Predicted Functional Partners:
ebA4197
Putative transferase.
       0.565
hyfF
Formate hydrogenlyase subunit, similar to NuoM subunit of complex I.
       0.550
hyfE
Hydrogenase 4 membrane component.
       0.550
hyfD
Formate hydrogenlyase membrane subunit subunit HyfD.
       0.550
hyfB
Hydrogenase-4 component B.
       0.550
pabA
Anthranilate synthase (Component II).
       0.525
hyfI
Subunit of putative formate hydrogenlyase-like membrane complex.
       0.459
hyfG
Subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenases.
       0.459
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.406
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.404
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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