Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4230Hypothetical protein. (83 aa)    
Predicted Functional Partners:
ebA4229
Probable cytochrome C oxidase assembly transmembrane protein.
  
    0.817
coxC
Cytochrome c oxidase, subunit III.
  
    0.742
ebA3176
Hypothetical protein.
  
     0.722
ebA6064
Probable thioredoxin-like protein.
  
     0.638
RS02795
Conserved hypothetical protein.
  
     0.606
ebA3180
Hypothetical protein.
  
     0.585
ebA521
Hypothetical protein.
  
     0.548
ebA6069
Conserved hypothetical protein,putatively exported via twin-arginine system.
  
     0.537
coxA-2
Cytochrome C oxidase, subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
    0.530
ebA3587
Hypothetical protein.
  
     0.505
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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