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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4238Putative SCO1/SenC family protein,probably involved in biogenesis of respiratory cytochrome aa3 oxidase. (195 aa)    
Predicted Functional Partners:
ctaB
Prenyltransferase, probably involved in heme a synthesis; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.898
ctaA
Putative cytochrome aa3 oxidase assembly protein, related to CtaA.
 
 
 0.855
ebA4233
SURF1 family protein.
 
  
 0.815
ebA3480
Hypothetical protein.
 
 
 0.774
ebA6147
Conserved hypothetical protein.
 
   
 0.724
ebA4234
Probable transmembrane protein.
       0.679
ebA4229
Probable cytochrome C oxidase assembly transmembrane protein.
 
 
 0.678
coxB-2
Cytochrome C oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.608
coxB-3
Cytochrome c oxidase, subunit II.
 
 
 0.592
coxB2
Probable cytochrome-c oxidase subunit II.
 
 
 0.580
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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