STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ebA4238Putative SCO1/SenC family protein,probably involved in biogenesis of respiratory cytochrome aa3 oxidase. (195 aa)    
Predicted Functional Partners:
ctaA
Putative cytochrome aa3 oxidase assembly protein, related to CtaA.
 
 0.901
ctaB
Prenyltransferase, probably involved in heme a synthesis; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.894
ebA4233
SURF1 family protein.
 
 
 0.853
ebA3480
Hypothetical protein.
 
 
 0.760
ebA4229
Probable cytochrome C oxidase assembly transmembrane protein.
 
 0.748
ebA6147
Conserved hypothetical protein.
 
   
 0.718
ebA4234
Probable transmembrane protein.
       0.679
coxB-2
Cytochrome C oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.634
coxB-3
Cytochrome c oxidase, subunit II.
 
 0.618
coxB2
Probable cytochrome-c oxidase subunit II.
 
 0.607
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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